4DN News
- 4DN Cells WG Summary of Activities (from 1-18-2016 to 12-10-2019). This legacy document will maximize the utility of all Cells WG established resources in the 4DN Phase II.
- Check out the two protocols approved by the Steering Committee this month (August 18, 2020) on the 4DN Portal Protocol Repository:
- iMARGI - in situ Mapping of RNA-chromatin interactions (iMARGI) protocol for mapping of chromatin-associated RNAs.
- PLAC-seq/HiChIP/in situ ChIA-PET - PLAC-seq/HiChIP/in situ ChIA-PET protocols to detect and quantify chromatin contacts anchored at genomic regions associated with specific DNA binding proteins or histone modifications.
- #FundingOpportunity! NHGRI is seeking applications for the Impact of Genomic Variation on Function (IGVF) Consortium, a multi-component project with an overarching goal of understanding how genomic variation affects human health and disease.
- Systematic Characterization of Genomic Variation on Genomic Function and Phenotype (UM1 Clinical Trial Not Allowed) - This FOA seeks applications to experimentally correlate genomic variants with their effects on genomic function.
- Defining Genomic Influence on Gene Network Regulation (U01 Clinical Trial Not Allowed) - This FOA seeks applications for research projects to explore the effects of genomic variation on phenotypes at the network level.
- Single-cell Profiling of Regulatory Element and Gene Activity in Relationship to Genome Function (U01) - will establish Mapping Centers that will generate single-cell, multi-omic maps of genes and regulatory elements in human & mouse.
- Genomic Variation and Function Data and Administrative Coordinating Center (U24 Clinical Trial Not Allowed) - soliciting applications for the Genomic Variation and Function Data and Administrative Coordinating Center (DACC).
- Developing Predictive Models of the Impact of Genomic Variation on Function (U01) - seeks applications for Predictive Modeling Projects that will develop and apply computational models to predict the impact of genomic variation on genome function.
4DN Publications
Please notify 4DN OH at oh@4dnucleome.org of your new publications and tweet it by tagging us with @4DNucleome.
Your publication will be added to the 4DN Publication Repository accessible from the 4D Nucleome Web Portal.
Your publication will be added to the 4DN Publication Repository accessible from the 4D Nucleome Web Portal.
4DN Pre-prints
Please notify OH (oh@4dnucleome.org) and Riccardo Calandrelli (rcalandrelli@eng.ucsd.edu) to add your pre-print into the 4DN bioRxiv channel and tweet it by tagging us with @4DNucleome.
Your pre-print will be added also to the 4DN Pre-print Repository accessible from the 4D Nucleome Web Portal.
Your pre-print will be added also to the 4DN Pre-print Repository accessible from the 4D Nucleome Web Portal.
Scientific Webinar Series
We have concluded the Scientific Webinar Series sessions for the first phase of 4D Nucleome. Thank you to all who have presented and joined over the past 5 years!
You can find Scientific Webinar presentation slides on the 4DN Wiki.
Upcoming 4DN meetings (September 2020)
Working Group email lists
